Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015864532.1_cds_XP_016516026.1_28309
CDS Infomation

[gene=LOC107832680] [db_xref=GeneID:107832680] [protein=NEDD8 ultimate buster 1-like] [protein_id=XP_016516026.1] [location=join(47333..47634,48976..49098,49196..49292,49719..49754,50285..50472,50572..50674,51185..51366,51461..51538,52083..52185,53232..53325,53676..54058)] [gbkey=CDS]
Sequence

ATGGGGTCAGCAAAATTGAAGATAGGTGGGGTATGGAGTGGAGTAATAGAAGTAGAATTA
GAAGAATGGACAGTACCAATGTTAAGAGAAGAAATTGCAAAAAGATCAGGCGTTGAAACG
ATCAACCTTATATGTGCTGGTAAATTGTTGAAAGATGGTGATGGAACTGAGAAGTTAAGC
CAATTGGGTGTTAAAAATAATGCAAAGATTTTGGCTTCTAAGGTTTCTATTGATCAAGGC
AAGTCTGTAAAAGATGAATCTTTGGCTGAGGAAGAACGTTGCACTAGGCTTTCAAGGCTA
AAGGCTGCTGCTACTTCTCTGTCAAAGAGACATGCGGATGGCTCATTACCTGTTGAAGAT
TTCAATCTGGAGCTCGAAAATCAGAGTGGACAAAAGGTGCAACTGGGAACTGAGACTGAT
CAACGAGCAATAATGATGGGCCTAATGCTTCATACAAATGCAAAAGCCTTGATGAGGAAG
AAGAATTATAAAGAAGCACTAGAAGTGCTGACCATGGGAGAAGAAGCCTTCTCTCTCTGC
AACCCGAAACTCATTGAGATGGTTGACAATGTGCCGATTCTGCAAATAGACATGGTGTGG
TGCTACCTTATGCTCCGAGATATCAGCTGGCTCTCAGTTGCAGGAGTCCGCCTTGCAAAA
GCTAGAGAAGGGCTTGAGCGTTCTCATGGGAAGGAAGCGAGTCGTCTCAGACTGCTTCAA
AAAGGACGATACCCGGAGATTGCTCTACATTTGAGGTTGGAGCTGCTAGAAGGAGTAGTG
GCATATCATAGCGGTCAGATTGAAAAATCTAGAAAGTCCTTGACATCTGCTCAAGCCAAG
TTTTTGCAGCTTCAAATTCCAGATGAAGCTTTGTCCTTACTTTTGAGTATGGGCTACAAG
GAACGGGATGCCAAGAGAGCCCTGCGCATGAACAATCAAGTAGTAGAAAGCGCTGTTGAT
TTTCTTCTTGAGGAAAAAGAAAAGAAAGCAAGGCAAAGGGAGGACGACATCAGGCGGCGG
AAGGAGATCATAGATCAAAAGTGTTATGGAACGACTCACCTCGGAAAAGCTGTTGATCTC
GAGAGACTGAATGAATTGGTGTCAATTGGGTTTGAGAAAGAGCTTGCTGCAGAAGCACTT
CGACGAAATGAAAATGATACACAAAAAGCTCTGGATGACTTGACAAATCCGGAAGCTAAT
GCTTCGATACAGATACATATTGAGTCAAGGAAGAAGAAAAGGTTACGCCAAGCAGAGAAT
GCTGTTATTGAAGAAATTGTATCCATGGGTTTCCCCAGAGAAGCAGTGGCTGCAGCTGTT
CGCACTTTTGGCACGAGACAAGCAGCGATAGATCATCTACTTGCTTCTGCTGCAACAGAA
GATCAGAATGCAAATGATACTCTACACAACAATCAAGGGGAAGATGGCAATGCAAATAAT
CCTATAACTCACCAACAAAGTGAAAACAGAGCGGGTGCTAACACAGGTTCAAGTAGCGCG
GGAGGTCCAAGTCATAACAAAGTTGAGGAGCGGGATGTGGAAATGGAAGATGCGATTACA
GGGGAATTACTAAGAGGAGATGCTTACTCTGACTATGACATTGAGGTTACTGAAGAAGGT
GAAGCTATAAACGAATACTTAGCTTTAGTAACTATAGGAGATAACGTAGAGAATCGTCCA
TCTTCGTAA

Peptide Sequence

PEP ID

XP_016516026.1
PEP Infomation

PREDICTED: NEDD8 ultimate buster 1-like [Nicotiana tabacum]
Sequence

MGSAKLKIGGVWSGVIEVELEEWTVPMLREEIAKRSGVETINLICAGKLLKDGDGTEKLS
QLGVKNNAKILASKVSIDQGKSVKDESLAEEERCTRLSRLKAAATSLSKRHADGSLPVED
FNLELENQSGQKVQLGTETDQRAIMMGLMLHTNAKALMRKKNYKEALEVLTMGEEAFSLC
NPKLIEMVDNVPILQIDMVWCYLMLRDISWLSVAGVRLAKAREGLERSHGKEASRLRLLQ
KGRYPEIALHLRLELLEGVVAYHSGQIEKSRKSLTSAQAKFLQLQIPDEALSLLLSMGYK
ERDAKRALRMNNQVVESAVDFLLEEKEKKARQREDDIRRRKEIIDQKCYGTTHLGKAVDL
ERLNELVSIGFEKELAAEALRRNENDTQKALDDLTNPEANASIQIHIESRKKKRLRQAEN
AVIEEIVSMGFPREAVAAAVRTFGTRQAAIDHLLASAATEDQNANDTLHNNQGEDGNANN
PITHQQSENRAGANTGSSSAGGPSHNKVEERDVEMEDAITGELLRGDAYSDYDIEVTEEG
EAINEYLALVTIGDNVENRPSS

Transcript Sequence

Gene sequence data has not been registered.